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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015789683.1_cds_XP_016497622.1_1098
CDS Infomation

[gene=LOC107816416] [db_xref=GeneID:107816416] [protein=E3 ubiquitin-protein ligase RNF4-like] [protein_id=XP_016497622.1] [location=complement(join(160355..160579,161222..161334,162026..162083,162209..162507,163676..163721))] [gbkey=CDS]
Sequence

ATGAGCCATTGGTGGTCAAAATTATCGGACATTTTTCCAAATTTAGGAGATATAAGTTCG
AAGCTGCCGTTGGGAAGCACAAGTATTCATAGAATGAGCACCCAAGACAGAAGGGCACAT
CCGATTAGGTATACAAGGAACCACTCAAGAAGGAAGGCGGTACTAGATGTGGATCTAAAT
GCCACACCCCCAGCTGATAATAGGGATCAGGAAGGAACTTCAAGTCGTGCTGTTCCTGGG
GATGTGCCACCTGCACCAAGGGGTGCGTCTTTGACACCTGCCCTAATTGATGTTGAGGCA
CTTGATGATGATGTGATAATATCTTCTCCAAGGGCATTTGCAGAAGCAAAAAACAACTCC
ATAAGGACTCGTGGACAGGTTATTGTGGTTGATGAGGATTCTGAGGATCGTTTGCCTAAG
GCTAACAGTCGCAACAAGCGCAGAAGGGTCTTAACTAATGATCCAACATTAATTGGTGAC
ATTTACATAAACCTAGAAGCAAATAGCAGCTTAAAGACAGTCGCTGCACAGAGTGTTGTA
CCACCAAAGCCAAAAGAACCCACATTTAGCTGTCCTGTATGCATGGGTCCACTAGTTGAG
GAGATGTCAACGAAATGTGGTCATATCTTCTGCAAGGGTTGCATCAAGGCTTCTATAGCT
GCTCAGGGTAAATGTCCTACTTGTAGGAGGAAAATTACTATGAAAGACACCATAAGGGTG
TATCTTCCTACCACAAGTTGA

Peptide Sequence

PEP ID

XP_016497622.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Nicotiana tabacum]
Sequence

MSHWWSKLSDIFPNLGDISSKLPLGSTSIHRMSTQDRRAHPIRYTRNHSRRKAVLDVDLN
ATPPADNRDQEGTSSRAVPGDVPPAPRGASLTPALIDVEALDDDVIISSPRAFAEAKNNS
IRTRGQVIVVDEDSEDRLPKANSRNKRRRVLTNDPTLIGDIYINLEANSSLKTVAAQSVV
PPKPKEPTFSCPVCMGPLVEEMSTKCGHIFCKGCIKASIAAQGKCPTCRRKITMKDTIRV
YLPTTS

Transcript Sequence

Gene sequence data has not been registered.